Bohyung Lee
Ecole Doctorale des Sciences de la Vie, Santé, Agronomie et Environnement (SVSAE) de l’Université Clermont Auvergne (UCA). Soutenue le 28 Mai 2019.
High throughput study of biofilm and virulence in Listeria monocytogenes using innovative approaches
Listeria monocytogenes is a facultative anaerobic, Gram-positive and rod-shaped bacterium. It is multifaceted foodborne pathogen characterized by its adaptability in adverse conditions and proliferation in a wide range of environments from soil to mammalian host cells. The bacterium forms biofilms in food chain which is presumed to be a source of repeated food product contamination increasing the risk of listeriosis in consumers. L. monocytogenes isolates are grouped into four distinct phylogenetic divisions of 13 serotypes among which lineage I (mainly of 4b and 1/2b) and lineage II (mainly of 1/2a and 1/2c) represent most isolates. Their genomes are approximately 2.8-3.2 Mbp, composed of around 3,000 open reading frames with a high rate of nucleotide polymorphisms. The genetic heterogeneity is reflected on diversified clonal structure which correlates, to some extent, with phenotypic traits such as virulence or stress resistance. The thesis, therefore, investigated two most prominent phenotypes, biofilm formation and virulence potential, from various perspectives using state-of-the art technologies. Throughout the studies, large panels of isolates were used to represent the intraspecific diversity.
Firstly, sudden cold shock induced cellular adhesion to abiotic surfaces as a transient phenotypic change. In addition, cell surface of L. monocytogenes revealed strong electron-donor nature regardless of temperature and became more hydrophilic as cells adapted to cold. A mild but significant correlation was observed between affinity for ethyl acetate and cellular adhesion level suggesting the role of physicochemical property in adhesion step. Next, various food-related factors played distinct roles at different biofilm formation steps. Nutrient deprivation enhanced adhesion, however, impeded maturation step. Addition of NaCl to growth cultures stimulated biofilm production and, surprisingly, it significantly intensified biofilm maturation of nutrient-deprived cells. High degree of variation in relative biofilm productivity was observed among serotypes, genotypes, as well as isolates across culture conditions, however, certain genotype (clonal complex 26) revealed distinctively higher biofilm production under cold temperature (10°C) suggesting an association of genotype with biofilm phenotype. Assessment of genetic composition with regard to biofilm production by pan-genome-wide association study revealed that functions such as ‘Cell surface proteins’, ‘Soluble internalin, and ‘Transformation/Competence’ were highly enriched implying their roles in L. monocytogenes biofilm formation. Finally, transcriptome profiles were analysed in depth using RNA sequencing. Importantly, Principal Component Analysis refined a large dataset to strengthen experimental reproducibility and improve statistical power of correlation analyses. Certain transcriptional factors with key roles in virulence such as σB, PrfA, and CodY contributed to variations in basal transcripts level among isolates. High diversity of transcriptomes between lineage I and II as well as hyper- and hypovirulent genotypes was observed implying the importance of transcriptomic plasticity in the bacterial physiology. Transcripts level of numerous genes related to sugar metabolism and transport found to be correlated with in vivo virulence potential suggesting the involvement of such pathways in the infection in Galleria mellonella model system.
Conclusively, the thesis explored intraspecific diversity in L. monocytogenes and resulted in ample phenotypic, genomic, and transcriptomic findings. With the integrative omics approach in listeriology, the present work will contribute to unveiling the complex physiology and pathology of the bacterium.
Keywords: Listeria monocytogenes, biofilm, virulence, genomics, transcriptomics
Michel HEBRAUD
Merci beaucoup pour la publication des résumés de thèse de Bohyung Lee et Tiago Santos. Je trouve cette nouvelle rubrique très informative et intéressante.
Par contre, il est regrettable que le laboratoire et le(s) directeur(s) ou directrice(s) de thèse n’apparaissent nulle part dans la publication.
Bien cordialement,
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Declan Rice https://declan-rice.prostoprosport-fr.com Footballeur anglais, milieu defensif du club d’Arsenal et de l’equipe nationale equipe d’Angleterre. Originaire de Kingston upon Thames, Declan Rice s’est entraine a l’academie de football de Chelsea des l’age de sept ans. En 2014, il devient joueur de l’academie de football de West Ham United.
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Thibaut Nicolas Marc Courtois https://thhibaut-courtois.prostoprosport-fr.com Footballeur belge, gardien de but du club espagnol du Real Madrid . Lors de la saison 2010/11, il a ete reconnu comme le meilleur gardien de la Pro League belge, ainsi que comme joueur de l’annee pour Genk. Triple vainqueur du Trophee Ricardo Zamora
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Jamal Musiala https://jamal-musiala.prostoprosport-fr.com footballeur allemand, milieu offensif du club allemand du Bayern et du equipe nationale d’Allemagne. Il a joue pour les equipes anglaises des moins de 15 ans, des moins de 16 ans et des moins de 17 ans. En octobre 2018, il a dispute deux matchs avec l’equipe nationale d’Allemagne U16. En novembre 2020, il a fait ses debuts avec l’equipe d’Angleterre U21.
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Erling Breut Haaland https://erling-haaland.prostoprosport-br.com Futebolista noruegues, atacante do clube ingles Manchester City e Selecao da Noruega. Detentor do recorde da Premier League inglesa em gols por temporada.
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Philippe Coutinho Correia https://philippecoutinho.prostoprosport-br.com Brazilian footballer, midfielder of the English club Aston Villa, playing on loan for the Qatari club Al-Duhail. He is known for his vision, passing, dribbling and long-range ability.
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Lionel Messi https://lionelmessi.prostoprosport-br.com e um jogador de futebol argentino, atacante e capitao do clube da MLS Inter Miami. , capitao da selecao argentina. Campeao mundial, campeao sul-americano, vencedor da Finalissima, campeao olimpico. Considerado um dos melhores jogadores de futebol de todos os tempos.
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Kaka https://kaka.prostoprosport-br.com Futebolista brasileiro, meio-campista. O apelido “Kaka” e um diminutivo de Ricardo. Formado em Sao Paulo. De 2002 a 2016, integrou a Selecao Brasileira, pela qual disputou 92 partidas e marcou 29 gols. Campeao mundial 2002.
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Zlatan Ibrahimovic https://zlatan-ibrahimovic.prostoprosport-br.com Bosnian pronunciation: ibraxi?mo?it?]; genus. 3 October 1981, Malmo, Sweden) is a Swedish footballer who played as a striker. Former captain of the Swedish national team.
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Thibaut Nicolas Marc Courtois https://thhibaut-courtois.prostoprosport-fr.com Footballeur belge, gardien de but du club espagnol du Real Madrid . Lors de la saison 2010/11, il a ete reconnu comme le meilleur gardien de la Pro League belge, ainsi que comme joueur de l’annee pour Genk. Triple vainqueur du Trophee Ricardo Zamora
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Jude Bellingham https://jude-bellingham.prostoprosport-br.com Futebolista ingles, meio-campista do clube espanhol Real Madrid e do Selecao da Inglaterra. Em abril de 2024, ele ganhou o premio Breakthrough of the Year do Laureus World Sports Awards. Ele se tornou o primeiro jogador de futebol a recebe-lo.
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Robert Lewandowski https://robert-lewandowski.prostoprosport-br.com e um futebolista polones, atacante do clube espanhol Barcelona e capitao da selecao polonesa. Considerado um dos melhores atacantes do mundo. Cavaleiro da Cruz do Comandante da Ordem do Renascimento da Polonia.
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Ederson Santana de Moraes https://edersonmoraes.prostoprosport-br.com Futebolista brasileiro, goleiro do clube Manchester City e da Selecao Brasileira . Participante do Campeonato Mundial 2018. Bicampeao de Portugal pelo Benfica e pentacampeao de Inglaterra pelo Manchester City.
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Victor James Osimhen https://victor-osimhen.prostoprosport-br.com e um futebolista nigeriano que atua como atacante. O clube italiano Napoli e a selecao nigeriana.
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Romelu Menama Lukaku Bolingoli https://romelulukaku.prostoprosport-br.com Futebolista belga, atacante do clube ingles Chelsea e da selecao belga . Por emprestimo, ele joga pelo clube italiano Roma.
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Erling Breut Haaland https://erling-haaland.prostoprosport-cz.org je norsky fotbalista, ktery hraje jako utocnik za Anglicky klub Manchester City a norska reprezentace. Rekordman anglicke Premier League v poctu golu za sezonu.
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Kylian Mbappe Lotten https://kylian-mbappe.prostoprosport-cz.org Francouzsky fotbalista, utocnik Paris Saint-Germain a kapitan tymu francouzskeho tymu. 1. cervence 2024 se stane hracem spanelskeho klubu Real Madrid.
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Edson Arantes do Nascimento https://pele.prostoprosport-br.com Brazilian footballer, forward (attacking midfielder. Played for Santos clubs) and New York Cosmos. Played 92 matches and scored 77 goals for the Brazilian national team.
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Lionel Messi https://lionel-messi.prostoprosport-cz.org je argentinsky fotbalista, utocnik a kapitan klubu MLS Inter Miami. , kapitan argentinske reprezentace. Mistr sveta, vitez Jizni Ameriky, vitez finale, olympijsky vitez. Povazovan za jednoho z nejlepsich fotbalistu vsech dob.
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Antoine Griezmann https://antoine-griezmann.prostoprosport-cz.org Francouzsky fotbalista, utocnik a zaloznik za Atletico de Madrid. Hrac a vicekapitan francouzskeho narodniho tymu, clen tymu – mistr sveta 2018 Stribrny medailista z mistrovstvi Evropy 2016 a mistrovstvi sveta 2022.